CDS

Accession Number TCMCG060C07523
gbkey CDS
Protein Id XP_025014737.1
Location complement(join(134383..134402,135112..135253,135581..135704,135991..136097,136554..136647,136731..136927,137340..137411,137536..137650,138254..138370,138463..138554,138644..138820,138927..139001,139101..139241,139598..139786,140481..140546,140659..140809,141956..142024,142556..142704,142807..142938,143029..143354,143458..143494,144534..144588,144733..144794,144893..144913,145418..145420))
Gene LOC8277223
GeneID 8277223
Organism Ricinus communis

Protein

Length 910aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA34677
db_source XM_025158969.1
Definition coatomer subunit beta'-2 isoform X2 [Ricinus communis]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTCTCAGACTTGAAATTAAGAGGAAACTTGCTCAAAGATCAGAGAGAGTAAAATCTGTGGATCTACATCCAACAGAACCATGGATTCTAGTGAGTCTTTATTCAGGGACTGTTTGTATCTGGAACTACCAATCTCAGACTATGGCAAAATCTTTTGAGGTCACAGAGTTACCAGTTAGATCAGCTAAGTTTATTGCACGAAAGCAGTGGGTTGTTGCTGGAGCTGATGACATGTTTATCCGTGTGTACAACTACAATACAATGGATAAGATTAAAGTGTTTGAGGCACATACAGATTACATTAGATGTGTTGCTGTCCATCCTACCCTTCCATATGTCCTGTCATCATCTGATGATATGCTCATCAAGCTTTGGGATTGGGAGAAGGGTTGGGTGTGTACGCAGATATTTGAGGGACATTCCCATTATGTGATGCAAGTGACCTTTAATCCAAAGGACACAAACACTTTTGCAAGTGCATCCCTTGATCGTACCATAAAGATTTGGAATCTTGGCTCTCCCGACCCAAATTTTACTCTGGATGCCCATCAGAAAGGAGTAAATTGTGTTGATTACTTTACTGGCGGTGATAAGCCTTATCTAATTACTGGTTCTGATGATCACACTGCTAAGGTGTGGGACTATCAAACCAAAAGTTGTGTCCAGACACTAGAAGGCCATACTCATAATGTCTCTGCAGTATGTTTCCATCCAGAACTTCCTATAATAATCACTGGTTCTGAGGATGGGACAGTTCGCTTGTGGCATTCAACAACTTACAGGCTCGAGAACACATTGAATTATGGTCTTGAAAGAGTTTGGGCTGTTGGATACATGAAAGGCTCACGTCGCATTGTGATTGGTTATGATGAAGGAACCATTATGGTCAAAATTGGTCGAGAAGAACCTGTGGCTAGTATGGATAACAGTGGAAAGATTATATGGGCTAAACACAATGAAATTCAAACTGTGAACATTAAGAGCGTGGGAGCAGATTTTGAGGTTACTGATGGAGAAAGGTTGCCTTTGGCTGTCAAGGAGTTGGGAACATGTGATCTTTATCCACAAAGTTTAAAGCACAATCCCAATGGGAGATTTGTTGTCGTCTGTGGGGATGGTGAGTACATCATATATACAGCTTTAGCATGGAGGAATAGATCATTTGGTTCTGCACTGGAGTTCGTTTGGTCATCGGACGGAGAATATGCTGTCAGAGAGAGTACATCAAAGATTAAAATTTTTAGTAAGAATTTCCAGGAAAAGAGGAGTGTTCGACCAACATTTTCTGCTGAGCGTATTTTTGGAGGAACTCTGTTGGCAATGTGTGCAAACGACTTCATTTGTTTTTATGATTGGGCTGAATGCAGGTTGATTAGGAGGATTGATGTTACTGTAAAAAATCTTTATTGGGCTGATAGTGGTGATTTGGTGGCAATTGCTAGTGACACATCATTCTACATCCTCAAGTACAATCGCGACTTAGTTTCATCTTATTTAGACAGCGGGAGACCTGTGGATGAACAAGGTGTTGAGGATGCCTTTGAGCTTCTTCATGAAACCAATGAGCGTGTTAGGACTGGTTTATGGGTTGGGGATTGCTTTATTTATAACAACTCTTCCTGGAGACTTAATTATTGTGTTGGAGGAGAGGTAACCACAATGTATCATTTGGACCGCCCGATGTACTTGTTGGGATATCTTGCTAGTCAAAGTCGGGTGTATCTAATAGACAAGGAGTTTAATGTTATGGGGTACACTTTACTTCTTAGCTTAATTGAGTACAAGACTCTTGTGATGCGTGGGGACCTGGAAAGAGCCAATGAACTTTTGCCTTCAATTCCTAAAGAGCATCATAATAGTGTGGCTCGTTTCTTGGAATCACGTGGTATGATAGAAAATGCTCTGGAGGTAGCTACAGATCCTGATTACAAATTTGAGCTAGCTATACAACTTGGCAGACTTGAGATTGCTAAGGAAATTGCCACAGAAGTACAAAGTGAATCAAAATGGAAGCAGTTGGGAGAATTAGCTATTTCTACTGGAAAGTTAGAAATGGCTGAGGAATGTATGAAGCGTGCAACAGACTTGAGCGGTTTGTTGCTTTTATATTCTTCTCTAGGAGATGCTGAAGGGATTTCAAAACTAGCACCTCTGGCAAAAGAGCAAGGGAAGAACAATGTTGCATTCCTCTGTTTGTTTATGTTGGGCAAATTGGAAGATTGCCTCCAGATTTTGGTTGAAAGTAATCGGATACCTGAAGCTGCTTTAATGGCTCGATCCTATCTTCCAAGCAAGGTTCCAGAGATTGTAGCACTTTGGAGAAAAGATCTAAACAAGGTTAACCCAAAAGCTGCAGAATCTTTGGCCGATCCTGATGAGTATCCAAATTTGTTTGATGATTGGCAAGTTGCTTTGTCTGTTGAAACTCGAGTTGCAGAGACAAGGGGTGTTTATCCTCCCGCAGAGGAATATTTAAACCATGCTGACAGAACAAACATAACTCTTGTGGAGGCTTTCAGAAACATGCAAGTAGAAGAACCTCTTGAAAATGGAGATTATGATCATGAGGCTGCAGAGCAAAATGGAGAAGAGCAGATAATAGAAGAGCACAATGGTGAAGAAGGGAGCCAAGAGGAGGCTGTTGTGGTGGATGCTGATTCTACGGATGGTGCGGTACTCGTCAATGGAAACGAGGCTGAGGAAGAGTGGGTGCTTACGCCACATAACTAG
Protein:  
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRLWHSTTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKNFQEKRSVRPTFSAERIFGGTLLAMCANDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDLVSSYLDSGRPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANELLPSIPKEHHNSVARFLESRGMIENALEVATDPDYKFELAIQLGRLEIAKEIATEVQSESKWKQLGELAISTGKLEMAEECMKRATDLSGLLLLYSSLGDAEGISKLAPLAKEQGKNNVAFLCLFMLGKLEDCLQILVESNRIPEAALMARSYLPSKVPEIVALWRKDLNKVNPKAAESLADPDEYPNLFDDWQVALSVETRVAETRGVYPPAEEYLNHADRTNITLVEAFRNMQVEEPLENGDYDHEAAEQNGEEQIIEEHNGEEGSQEEAVVVDADSTDGAVLVNGNEAEEEWVLTPHN